Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs414730 chr17:39331536 T/C OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot
ACC rs4308795 chr9:96569871 G/A PLEKHA7 chr11:16798864-17035990:- 1.1 7.56 6.36E-10 Box Plot
ACC rs4349636 chr4:180591931 T/C GC chr4:72607410-72669758:- 0.82 7.53 7.21E-10 Box Plot
ACC rs4394038 chr4:179517089 C/T PRAMEF16 chr1:13495254-13498260:+ -0.63 -8.28 4.6E-11 Box Plot
ACC rs4525710 chr2:117697284 G/T PRHOXNB chr13:28552243-28562774:- 0.71 9.55 4.9E-13 Box Plot
ACC rs4543791 chr1:116267248 A/T TFDP3 chrX:132350697-132352376:- 0.9 8.15 7.42E-11 Box Plot
ACC rs4595174 chr9:8100328 T/C GAS7 chr17:9813926-10101868:- -0.97 -7.79 2.74E-10 Box Plot
ACC rs4636266 chr9:96565817 G/A PLEKHA7 chr11:16798864-17035990:- 1.1 7.56 6.36E-10 Box Plot
ACC rs4698190 chr4:17546280 A/T GC chr4:72607410-72669758:- 0.77 10.94 4.3E-15 Box Plot
ACC rs4708664 chr6:168535487 C/G GABRA4 chr4:46920917-46996424:- 0.76 7.54 6.83E-10 Box Plot
ACC rs4753399 chr11:91889384 G/A PRHOXNB chr13:28552243-28562774:- 0.6 7.85 2.18E-10 Box Plot
ACC rs4776425 chr15:69125973 C/A PRHOXNB chr13:28552243-28562774:- -0.61 -7.75 3.18E-10 Box Plot
ACC rs4797394 chr18:10011572 G/T CYP4F12 chr19:15783567-15807984:+ 0.91 8.07 9.96E-11 Box Plot
ACC rs4797395 chr18:10011637 C/A CYP4F12 chr19:15783567-15807984:+ 0.91 8.07 9.96E-11 Box Plot
ACC rs493514 chr17:39334456 G/A OR5V1 chr6:29323007-29399744:- -0.59 -7.88 1.95E-10 Box Plot